You can manage lfd from WHM » ConfigServer Security&Firewall » lfd - Login Failure Daemon
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To edit process ignore list, from the drop-down menu for "Edit lfd ignore file" choose "Process Tracking" file and click edit. To exclude a binary for example /usr/local/bin/Perl, add the following line at the end of the file.
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exe:/usr/local/bin/perl
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To exclude process related to a user say, nobody, add
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user:nobody
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Ensure that click "Change" to save the settings!